J4_4V6V_014

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

AACUG*CACAG*UGACG*CGUAAU

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|A|1772
4V6V|1|BA|A|1773
4V6V|1|BA|C|1774
4V6V|1|BA|U|1775
4V6V|1|BA|G|1776
*
4V6V|1|BA|C|1788
4V6V|1|BA|A|1789
4V6V|1|BA|C|1790
4V6V|1|BA|A|1791
4V6V|1|BA|G|1792
*
4V6V|1|BA|U|1827
4V6V|1|BA|G|1828
4V6V|1|BA|A|1829
4V6V|1|BA|C|1830
4V6V|1|BA|G|1831
*
4V6V|1|BA|C|1974
4V6V|1|BA|G|1975
4V6V|1|BA|U|1976
4V6V|1|BA|A|1977
4V6V|1|BA|A|1978
4V6V|1|BA|U|1979

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BD

50S ribosomal protein L2