J4_4V6X_007

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

4V6X|1|A5|A|2696

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|G|2618
4V6X|1|A5|G|2619
*
4V6X|1|A5|U|2637
4V6X|1|A5|G|2638
4V6X|1|A5|U|2639
4V6X|1|A5|G|2640
4V6X|1|A5|A|2641
4V6X|1|A5|A|2642
*
4V6X|1|A5|U|2692
4V6X|1|A5|G|2693
4V6X|1|A5|G|2694
4V6X|1|A5|A|2695
4V6X|1|A5|A|2696
4V6X|1|A5|A|2697
4V6X|1|A5|G|2698
*
4V6X|1|A5|U|2718
4V6X|1|A5|C|2719

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain CR

60S ribosomal protein L19

Chain CU

60S ribosomal protein L22

Chain Cg

60S ribosomal protein L34

Chain Ck

60S ribosomal protein L38