J4_4V6Y_004

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4V6Y|1|AA|C|183, 4V6Y|1|AA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Y|1|AA|G|142
4V6Y|1|AA|A|143
4V6Y|1|AA|G|144
*
4V6Y|1|AA|C|178
4V6Y|1|AA|A|179
4V6Y|1|AA|U|180
4V6Y|1|AA|A|181
4V6Y|1|AA|A|182
4V6Y|1|AA|C|183
4V6Y|1|AA|G|184
*
4V6Y|1|AA|C|193
4V6Y|1|AA|C|194
4V6Y|1|AA|A|195
4V6Y|1|AA|A|196
4V6Y|1|AA|A|197
4V6Y|1|AA|G|198
*
4V6Y|1|AA|U|219
4V6Y|1|AA|G|220
4V6Y|1|AA|C|221

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20