J4_4V70_002
3D structure
- PDB id
- 4V70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 17 Å
Loop
- Sequence
- G(4SU)GG*CGUC*GAAGGUCG*CC
- Length
- 18 nucleotides
- Bulged bases
- 4V70|1|A3|4SU|8, 4V70|1|A3|U|48, 4V70|1|A3|C|49
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V70_002 not in the Motif Atlas
- Homologous match to J4_7E8O_001
- Geometric discrepancy: 0.4394
- The information below is about J4_7E8O_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V70|1|A3|G|7
4V70|1|A3|4SU|8
4V70|1|A3|G|9
4V70|1|A3|G|10
*
4V70|1|A3|C|26
4V70|1|A3|G|27
4V70|1|A3|U|28
4V70|1|A3|C|29
*
4V70|1|A3|G|43
4V70|1|A3|A|44
4V70|1|A3|A|45
4V70|1|A3|G|46
4V70|1|A3|G|47
4V70|1|A3|U|48
4V70|1|A3|C|49
4V70|1|A3|G|50
*
4V70|1|A3|C|66
4V70|1|A3|C|67
Current chains
- Chain A3
- tRNA-fMet
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AM
- 30S ribosomal protein S13
- Chain B1
- 50S ribosomal protein L33
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 50S ribosomal protein L5
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