J4_4V71_010

3D structure

PDB id

4V71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

GGUUC*GGUGAGU*ACU*AAUCGUAC

Length

23 nucleotides

Bulged bases

4V71|1|BA|G|1311, 4V71|1|BA|G|1341, 4V71|1|BA|A|1342

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V71|1|BA|G|1310
4V71|1|BA|G|1311
4V71|1|BA|U|1312
4V71|1|BA|U|1313
4V71|1|BA|C|1314
*
4V71|1|BA|G|1338
4V71|1|BA|G|1339
4V71|1|BA|U|1340
4V71|1|BA|G|1341
4V71|1|BA|A|1342
4V71|1|BA|G|1343
4V71|1|BA|U|1344
*
4V71|1|BA|A|1403
4V71|1|BA|C|1404
4V71|1|BA|U|1405
*
4V71|1|BA|A|1597
4V71|1|BA|A|1598
4V71|1|BA|U|1599
4V71|1|BA|C|1600
4V71|1|BA|G|1601
4V71|1|BA|U|1602
4V71|1|BA|A|1603
4V71|1|BA|C|1604

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BT

50S ribosomal protein L23