J4_4V75_008

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

4V75|1|BA|U|653, 4V75|1|BA|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4V75_008 not in the Motif Atlas

Homologous match to J4_5J7L_020

Geometric discrepancy: 0.3172

The information below is about J4_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_60168.1

Basepair signature

cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW

Number of instances in this motif group

2

Unit IDs

4V75|1|BA|C|601
4V75|1|BA|A|602
4V75|1|BA|A|603
4V75|1|BA|G|604
*
4V75|1|BA|C|624
4V75|1|BA|G|625
4V75|1|BA|A|626
4V75|1|BA|A|627
4V75|1|BA|G|628
*
4V75|1|BA|C|635
4V75|1|BA|G|636
4V75|1|BA|A|637
4V75|1|BA|G|638
*
4V75|1|BA|C|650
4V75|1|BA|G|651
4V75|1|BA|U|652
4V75|1|BA|U|653
4V75|1|BA|A|654
4V75|1|BA|A|655
4V75|1|BA|G|656

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15