J4_4V78_008

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CAAG*CGAAG*CGAGUCU*GGCGUUAAG

Length

25 nucleotides

Bulged bases

4V78|1|BA|A|603, 4V78|1|BA|U|653, 4V78|1|BA|A|654

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V78|1|BA|C|601
4V78|1|BA|A|602
4V78|1|BA|A|603
4V78|1|BA|G|604
*
4V78|1|BA|C|624
4V78|1|BA|G|625
4V78|1|BA|A|626
4V78|1|BA|A|627
4V78|1|BA|G|628
*
4V78|1|BA|C|635
4V78|1|BA|G|636
4V78|1|BA|A|637
4V78|1|BA|G|638
4V78|1|BA|U|639
4V78|1|BA|C|640
4V78|1|BA|U|641
*
4V78|1|BA|G|648
4V78|1|BA|G|649
4V78|1|BA|C|650
4V78|1|BA|G|651
4V78|1|BA|U|652
4V78|1|BA|U|653
4V78|1|BA|A|654
4V78|1|BA|A|655
4V78|1|BA|G|656

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15