J4_4V7A_013

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CUG*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

4V7A|1|BA|U|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4V7A_013 not in the Motif Atlas

Homologous match to J4_9DFE_008

Geometric discrepancy: 0.2941

The information below is about J4_9DFE_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_93343.1

Basepair signature

cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F

Number of instances in this motif group

4

Unit IDs

4V7A|1|BA|C|1833
4V7A|1|BA|U|1834
4V7A|1|BA|G|1835
*
4V7A|1|BA|C|1905
4V7A|1|BA|G|1906
*
4V7A|1|BA|C|1924
4V7A|1|BA|C|1925
4V7A|1|BA|U|1926
4V7A|1|BA|A|1927
4V7A|1|BA|A|1928
4V7A|1|BA|G|1929
4V7A|1|BA|G|1930
4V7A|1|BA|U|1931
4V7A|1|BA|A|1932
4V7A|1|BA|G|1933
*
4V7A|1|BA|C|1967
4V7A|1|BA|G|1968
4V7A|1|BA|A|1969
4V7A|1|BA|A|1970
4V7A|1|BA|U|1971
4V7A|1|BA|G|1972

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BC

50S ribosomal protein L2