J4_4V7C_003

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CGUAAAGCG*CGAAAGC*GCCGUAAACGAUGU*ACCG

Length

34 nucleotides

Bulged bases

4V7C|1|AA|A|572, 4V7C|1|AA|C|576, 4V7C|1|AA|A|815, 4V7C|1|AA|G|818, 4V7C|1|AA|U|820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7C|1|AA|C|569
4V7C|1|AA|G|570
4V7C|1|AA|U|571
4V7C|1|AA|A|572
4V7C|1|AA|A|573
4V7C|1|AA|A|574
4V7C|1|AA|G|575
4V7C|1|AA|C|576
4V7C|1|AA|G|577
*
4V7C|1|AA|C|764
4V7C|1|AA|G|765
4V7C|1|AA|A|766
4V7C|1|AA|A|767
4V7C|1|AA|A|768
4V7C|1|AA|G|769
4V7C|1|AA|C|770
*
4V7C|1|AA|G|809
4V7C|1|AA|C|810
4V7C|1|AA|C|811
4V7C|1|AA|G|812
4V7C|1|AA|U|813
4V7C|1|AA|A|814
4V7C|1|AA|A|815
4V7C|1|AA|A|816
4V7C|1|AA|C|817
4V7C|1|AA|G|818
4V7C|1|AA|A|819
4V7C|1|AA|U|820
4V7C|1|AA|G|821
4V7C|1|AA|U|822
*
4V7C|1|AA|A|878
4V7C|1|AA|C|879
4V7C|1|AA|C|880
4V7C|1|AA|G|881

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AH

30S ribosomal protein S8

Chain AL

30S ribosomal protein S12

Chain AO

30S ribosomal protein S15

Chain AQ

30S ribosomal protein S17

Chain AU

30S ribosomal protein S21

Chain BA

Large subunit ribosomal RNA; LSU rRNA