J4_4V7C_004

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GUGGAG*CUACAAUG*CGUAGUCCGGAUU*AUGAAGUCGGAAU

Length

40 nucleotides

Bulged bases

4V7C|1|AA|U|1240, 4V7C|1|AA|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7C|1|AA|G|942
4V7C|1|AA|U|943
4V7C|1|AA|G|944
4V7C|1|AA|G|945
4V7C|1|AA|A|946
4V7C|1|AA|G|947
*
4V7C|1|AA|C|1234
4V7C|1|AA|U|1235
4V7C|1|AA|A|1236
4V7C|1|AA|C|1237
4V7C|1|AA|A|1238
4V7C|1|AA|A|1239
4V7C|1|AA|U|1240
4V7C|1|AA|G|1241
*
4V7C|1|AA|C|1296
4V7C|1|AA|G|1297
4V7C|1|AA|U|1298
4V7C|1|AA|A|1299
4V7C|1|AA|G|1300
4V7C|1|AA|U|1301
4V7C|1|AA|C|1302
4V7C|1|AA|C|1303
4V7C|1|AA|G|1304
4V7C|1|AA|G|1305
4V7C|1|AA|A|1306
4V7C|1|AA|U|1307
4V7C|1|AA|U|1308
*
4V7C|1|AA|A|1329
4V7C|1|AA|U|1330
4V7C|1|AA|G|1331
4V7C|1|AA|A|1332
4V7C|1|AA|A|1333
4V7C|1|AA|G|1334
4V7C|1|AA|U|1335
4V7C|1|AA|C|1336
4V7C|1|AA|G|1337
4V7C|1|AA|G|1338
4V7C|1|AA|A|1339
4V7C|1|AA|A|1340
4V7C|1|AA|U|1341

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AM

30S ribosomal protein S13

Chain AW

Transfer RNA; tRNA