J4_4V7D_004

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CGAUAAA*UCG*CGCUU*AG

Length

17 nucleotides

Bulged bases

4V7D|1|AA|G|1271, 4V7D|1|AA|A|1272, 4V7D|1|AA|U|1273, 4V7D|1|AA|A|1275, 4V7D|1|AA|C|1646, 4V7D|1|AA|U|1647

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|AA|C|1270
4V7D|1|AA|G|1271
4V7D|1|AA|A|1272
4V7D|1|AA|U|1273
4V7D|1|AA|A|1274
4V7D|1|AA|A|1275
4V7D|1|AA|A|1276
*
4V7D|1|AA|U|1294
4V7D|1|AA|C|1295
4V7D|1|AA|G|1296
*
4V7D|1|AA|C|1644
4V7D|1|AA|G|1645
4V7D|1|AA|C|1646
4V7D|1|AA|U|1647
4V7D|1|AA|U|1648
*
4V7D|1|AA|A|2009
4V7D|1|AA|G|2010

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A4

50S ribosomal protein L32

Chain AQ

50S ribosomal protein L17

Chain AV

50S ribosomal protein L22