J4_4V7D_016

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAUAG*CAG*CGUGUCCUU*GAGUC

Length

22 nucleotides

Bulged bases

4V7D|1|BV|U|8, 4V7D|1|BV|U|47, 4V7D|1|BV|C|48

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|BV|G|6
4V7D|1|BV|A|7
4V7D|1|BV|U|8
4V7D|1|BV|A|9
4V7D|1|BV|G|10
*
4V7D|1|BV|C|25
4V7D|1|BV|A|26
4V7D|1|BV|G|27
*
4V7D|1|BV|C|43
4V7D|1|BV|G|44
4V7D|1|BV|U|45
4V7D|1|BV|G|46
4V7D|1|BV|U|47
4V7D|1|BV|C|48
4V7D|1|BV|C|49
4V7D|1|BV|U|50
4V7D|1|BV|U|51
*
4V7D|1|BV|G|63
4V7D|1|BV|A|64
4V7D|1|BV|G|65
4V7D|1|BV|U|66
4V7D|1|BV|C|67

Current chains

Chain BV

tRNA

Nearby chains

Chain AA

Large subunit ribosomal RNA; LSU rRNA

Chain AP

50S ribosomal protein L16

Chain BY

viomycin

Chain BZ

Elongation Factor G