J4_4V7D_022

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GG*UU*ACGAG*UGAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4V7D_022 not in the Motif Atlas

Homologous match to J4_7A0S_007

Geometric discrepancy: 0.3209

The information below is about J4_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_91813.1

Basepair signature

cWW-cWW-F-tSH-cWW-F-F-F-cWW-F

Number of instances in this motif group

1

Unit IDs

4V7D|1|AA|G|1444
4V7D|1|AA|G|1445
*
4V7D|1|AA|U|1466
4V7D|1|AA|U|1467
*
4V7D|1|AA|A|1525
4V7D|1|AA|C|1526
4V7D|1|AA|G|1527
4V7D|1|AA|A|1528
4V7D|1|AA|G|1529
*
4V7D|1|AA|U|1542
4V7D|1|AA|G|1543
4V7D|1|AA|A|1544
4V7D|1|AA|A|1545
4V7D|1|AA|G|1546
4V7D|1|AA|C|1547

Current chains

Chain AA

23S ribosomal RNA

Nearby chains