3D structure

PDB id
4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
7.6 Å

Loop

Sequence
CGAAG*UUGACUGCGAG*CGAGCAGGU*AGG
Length
28 nucleotides
Bulged bases
4V7D|1|AA|A|2288
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7D|1|AA|C|2285
4V7D|1|AA|G|2286
4V7D|1|AA|A|2287
4V7D|1|AA|A|2288
4V7D|1|AA|G|2289
*
4V7D|1|AA|U|2343
4V7D|1|AA|U|2344
4V7D|1|AA|G|2345
4V7D|1|AA|A|2346
4V7D|1|AA|C|2347
4V7D|1|AA|U|2348
4V7D|1|AA|G|2349
4V7D|1|AA|C|2350
4V7D|1|AA|G|2351
4V7D|1|AA|A|2352
4V7D|1|AA|G|2353
*
4V7D|1|AA|C|2364
4V7D|1|AA|G|2365
4V7D|1|AA|A|2366
4V7D|1|AA|G|2367
4V7D|1|AA|C|2368
4V7D|1|AA|A|2369
4V7D|1|AA|G|2370
4V7D|1|AA|G|2371
4V7D|1|AA|U|2372
*
4V7D|1|AA|A|2381
4V7D|1|AA|G|2382
4V7D|1|AA|G|2383

Current chains

Chain AA
23S ribosomal RNA

Nearby chains

Chain A5
50S ribosomal protein L33
Chain A7
50S ribosomal protein L35
Chain AR
50S ribosomal protein L18
Chain AZ
50S ribosomal protein L27

Coloring options:

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