J4_4V7D_029

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UGGA*UACAAUG*CGUAGUCCGGAUU*AUGAAGUCGGAA

Length

36 nucleotides

Bulged bases

4V7D|1|BA|U|1240, 4V7D|1|BA|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|BA|U|943
4V7D|1|BA|G|944
4V7D|1|BA|G|945
4V7D|1|BA|A|946
*
4V7D|1|BA|U|1235
4V7D|1|BA|A|1236
4V7D|1|BA|C|1237
4V7D|1|BA|A|1238
4V7D|1|BA|A|1239
4V7D|1|BA|U|1240
4V7D|1|BA|G|1241
*
4V7D|1|BA|C|1296
4V7D|1|BA|G|1297
4V7D|1|BA|U|1298
4V7D|1|BA|A|1299
4V7D|1|BA|G|1300
4V7D|1|BA|U|1301
4V7D|1|BA|C|1302
4V7D|1|BA|C|1303
4V7D|1|BA|G|1304
4V7D|1|BA|G|1305
4V7D|1|BA|A|1306
4V7D|1|BA|U|1307
4V7D|1|BA|U|1308
*
4V7D|1|BA|A|1329
4V7D|1|BA|U|1330
4V7D|1|BA|G|1331
4V7D|1|BA|A|1332
4V7D|1|BA|A|1333
4V7D|1|BA|G|1334
4V7D|1|BA|U|1335
4V7D|1|BA|C|1336
4V7D|1|BA|G|1337
4V7D|1|BA|G|1338
4V7D|1|BA|A|1339
4V7D|1|BA|A|1340

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BG

30S ribosomal protein S7

Chain BI

30S ribosomal protein S9

Chain BM

30S ribosomal protein S13

Chain BW

Transfer RNA; tRNA