J4_4V7E_010

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CUAAG*UUGAUU*AACC*GUG

Length

18 nucleotides

Bulged bases

4V7E|1|Aa|A|2660, 4V7E|1|Aa|U|2755

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|C|2657
4V7E|1|Aa|U|2658
4V7E|1|Aa|A|2659
4V7E|1|Aa|A|2660
4V7E|1|Aa|G|2661
*
4V7E|1|Aa|U|2715
4V7E|1|Aa|U|2716
4V7E|1|Aa|G|2717
4V7E|1|Aa|A|2718
4V7E|1|Aa|U|2719
4V7E|1|Aa|U|2720
*
4V7E|1|Aa|A|2742
4V7E|1|Aa|A|2743
4V7E|1|Aa|C|2744
4V7E|1|Aa|C|2745
*
4V7E|1|Aa|G|2754
4V7E|1|Aa|U|2755
4V7E|1|Aa|G|2756

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain CT

60S ribosomal protein L21E

Chain Cb

60S ribosomal protein L29E

Chain Co

60S ribosomal protein L44E