J4_4V7I_014

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GCG*CGAAAG*CCGUAAACGAUGU*ACC

Length

25 nucleotides

Bulged bases

4V7I|1|BA|C|576, 4V7I|1|BA|A|819

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7I|1|BA|G|575
4V7I|1|BA|C|576
4V7I|1|BA|G|577
*
4V7I|1|BA|C|764
4V7I|1|BA|G|765
4V7I|1|BA|A|766
4V7I|1|BA|A|767
4V7I|1|BA|A|768
4V7I|1|BA|G|769
*
4V7I|1|BA|C|810
4V7I|1|BA|C|811
4V7I|1|BA|G|812
4V7I|1|BA|U|813
4V7I|1|BA|A|814
4V7I|1|BA|A|815
4V7I|1|BA|A|816
4V7I|1|BA|C|817
4V7I|1|BA|G|818
4V7I|1|BA|A|819
4V7I|1|BA|U|820
4V7I|1|BA|G|821
4V7I|1|BA|U|822
*
4V7I|1|BA|A|878
4V7I|1|BA|C|879
4V7I|1|BA|C|880

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BH

30S ribosomal protein S8

Chain BL

30S ribosomal protein S12

Chain BO

30S ribosomal protein S15

Chain BQ

30S ribosomal protein S17

Chain BU

30S ribosomal protein S21