J4_4V7M_033
3D structure
- PDB id
- 4V7M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of Capreomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UAUCGCC*GGCAC*GCUUUCC*GUA
- Length
- 22 nucleotides
- Bulged bases
- 4V7M|1|AY|U|8, 4V7M|1|AY|U|45, 4V7M|1|AY|U|46, 4V7M|1|AY|C|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_57327.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-cWW-F-cWW-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
4V7M|1|AY|U|6
4V7M|1|AY|A|7
4V7M|1|AY|U|8
4V7M|1|AY|C|9
4V7M|1|AY|G|10
4V7M|1|AY|C|11
4V7M|1|AY|C|12
*
4V7M|1|AY|G|22
4V7M|1|AY|G|23
4V7M|1|AY|C|24
4V7M|1|AY|A|25
4V7M|1|AY|C|26
*
4V7M|1|AY|G|42
4V7M|1|AY|C|43
4V7M|1|AY|U|44
4V7M|1|AY|U|45
4V7M|1|AY|U|46
4V7M|1|AY|C|47
4V7M|1|AY|C|48
*
4V7M|1|AY|G|64
4V7M|1|AY|U|65
4V7M|1|AY|A|66
Current chains
- Chain AY
- tRNA-Gln
Nearby chains
- Chain AG
- 30S ribosomal protein S7
- Chain AK
- 30S ribosomal protein S11
- Chain B6
- 50S ribosomal protein L33
- Chain BC
- 50S ribosomal protein L1
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