J4_4V7R_001
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CAUUAAAUC*GCC*GUAACG*CGG
- Length
- 21 nucleotides
- Bulged bases
- 4V7R|1|A1|A|105, 4V7R|1|A1|C|308, 4V7R|1|A1|A|359
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7R|1|A1|C|99
4V7R|1|A1|A|100
4V7R|1|A1|U|101
4V7R|1|A1|U|102
4V7R|1|A1|A|103
4V7R|1|A1|A|104
4V7R|1|A1|A|105
4V7R|1|A1|U|106
4V7R|1|A1|C|107
*
4V7R|1|A1|G|307
4V7R|1|A1|C|308
4V7R|1|A1|C|309
*
4V7R|1|A1|G|357
4V7R|1|A1|U|358
4V7R|1|A1|A|359
4V7R|1|A1|A|360
4V7R|1|A1|C|361
4V7R|1|A1|G|362
*
4V7R|1|A1|C|382
4V7R|1|A1|G|383
4V7R|1|A1|G|384
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain AF
- 40S ribosomal protein S11
- Chain AP
- 40S ribosomal protein S23
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