J4_4V7R_002
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GUUAAAAAG*CGAAAG*CCAUAAACUAUG*UUC
- Length
- 30 nucleotides
- Bulged bases
- 4V7R|1|A1|A|619, 4V7R|1|A1|A|623, 4V7R|1|A1|A|1026, 4V7R|1|A1|U|1029
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7R|1|A1|G|616
4V7R|1|A1|U|617
4V7R|1|A1|U|618
4V7R|1|A1|A|619
4V7R|1|A1|A|620
4V7R|1|A1|A|621
4V7R|1|A1|A|622
4V7R|1|A1|A|623
4V7R|1|A1|G|624
*
4V7R|1|A1|C|975
4V7R|1|A1|G|976
4V7R|1|A1|A|977
4V7R|1|A1|A|978
4V7R|1|A1|A|979
4V7R|1|A1|G|980
*
4V7R|1|A1|C|1021
4V7R|1|A1|C|1022
4V7R|1|A1|A|1023
4V7R|1|A1|U|1024
4V7R|1|A1|A|1025
4V7R|1|A1|A|1026
4V7R|1|A1|A|1027
4V7R|1|A1|C|1028
4V7R|1|A1|U|1029
4V7R|1|A1|A|1030
4V7R|1|A1|U|1031
4V7R|1|A1|G|1032
*
4V7R|1|A1|U|1103
4V7R|1|A1|U|1104
4V7R|1|A1|C|1105
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain AF
- 40S ribosomal protein S11
- Chain AG
- 40S ribosomal protein S13
- Chain AO
- 40S ribosomal protein S22-A
- Chain AP
- 40S ribosomal protein S23
Coloring options: