J4_4V7R_024

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UAAUU*AUUC*GCU*AUG

Length

15 nucleotides

Bulged bases

4V7R|1|D1|A|3011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7R|1|D1|U|3010
4V7R|1|D1|A|3011
4V7R|1|D1|A|3012
4V7R|1|D1|U|3013
4V7R|1|D1|U|3014
*
4V7R|1|D1|A|3040
4V7R|1|D1|U|3041
4V7R|1|D1|U|3042
4V7R|1|D1|C|3043
*
4V7R|1|D1|G|3098
4V7R|1|D1|C|3099
4V7R|1|D1|U|3100
*
4V7R|1|D1|A|3134
4V7R|1|D1|U|3135
4V7R|1|D1|G|3136

Current chains

Chain D1

25S ribosomal RNA

Nearby chains

Chain DC

60S ribosomal protein L3

Chain DP

60S ribosomal protein L16-A

Chain DU

60S ribosomal protein L23