J4_4V91_007
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUG*CG*CUUAAGGUAG*UGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 4V91|1|1|U|2314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V91_007 not in the Motif Atlas
- Homologous match to J4_8C3A_007
- Geometric discrepancy: 0.0985
- The information below is about J4_8C3A_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V91|1|1|C|2192
4V91|1|1|U|2193
4V91|1|1|G|2194
*
4V91|1|1|C|2248
4V91|1|1|G|2249
*
4V91|1|1|C|2267
4V91|1|1|U|2268
4V91|1|1|U|2269
4V91|1|1|A|2270
4V91|1|1|A|2271
4V91|1|1|G|2272
4V91|1|1|G|2273
4V91|1|1|U|2274
4V91|1|1|A|2275
4V91|1|1|G|2276
*
4V91|1|1|U|2310
4V91|1|1|G|2311
4V91|1|1|A|2312
4V91|1|1|A|2313
4V91|1|1|U|2314
4V91|1|1|G|2315
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain A
- UL2
- Chain n
- EL41
Coloring options: