J4_4V9C_016

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAGGGG*CCGCAUAACG*CCAAAG*UGC

Length

25 nucleotides

Bulged bases

4V9C|1|CA|C|183, 4V9C|1|CA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|CA|G|142
4V9C|1|CA|A|143
4V9C|1|CA|G|144
4V9C|1|CA|G|145
4V9C|1|CA|G|146
4V9C|1|CA|G|147
*
4V9C|1|CA|C|175
4V9C|1|CA|C|176
4V9C|1|CA|G|177
4V9C|1|CA|C|178
4V9C|1|CA|A|179
4V9C|1|CA|U|180
4V9C|1|CA|A|181
4V9C|1|CA|A|182
4V9C|1|CA|C|183
4V9C|1|CA|G|184
*
4V9C|1|CA|C|193
4V9C|1|CA|C|194
4V9C|1|CA|A|195
4V9C|1|CA|A|196
4V9C|1|CA|A|197
4V9C|1|CA|G|198
*
4V9C|1|CA|U|219
4V9C|1|CA|G|220
4V9C|1|CA|C|221

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CT

30S ribosomal protein S20