J4_4V9P_040
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGUAAUG*UG*CUAG*CC
- Length
- 16 nucleotides
- Bulged bases
- 4V9P|1|FA|U|121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V9P_040 not in the Motif Atlas
- Homologous match to J4_5J7L_001
- Geometric discrepancy: 0.2281
- The information below is about J4_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_35578.3
- Basepair signature
- cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V9P|1|FA|G|115
4V9P|1|FA|A|116
4V9P|1|FA|G|117
4V9P|1|FA|U|118
4V9P|1|FA|A|119
4V9P|1|FA|A|120
4V9P|1|FA|U|121
4V9P|1|FA|G|122
*
4V9P|1|FA|U|239
4V9P|1|FA|G|240
*
4V9P|1|FA|C|286
4V9P|1|FA|U|287
4V9P|1|FA|A|288
4V9P|1|FA|G|289
*
4V9P|1|FA|C|311
4V9P|1|FA|C|312
Current chains
- Chain FA
- 16S rRNA
Nearby chains
- Chain FP
- 30S ribosomal protein S16
- Chain FQ
- 30S ribosomal protein S17
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