J4_4W29_006

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CUAAAC*GGGUCG*CUG*UAAG

Length

19 nucleotides

Bulged bases

4W29|1|BA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|BA|C|268
4W29|1|BA|U|269
4W29|1|BA|A|270
4W29|1|BA|A|270|||A
4W29|1|BA|A|270|||B
4W29|1|BA|C|270|||C
*
4W29|1|BA|G|270|||W
4W29|1|BA|G|270|||X
4W29|1|BA|G|270|||Y
4W29|1|BA|U|270|||Z
4W29|1|BA|C|271|||A
4W29|1|BA|G|271|||B
*
4W29|1|BA|C|404
4W29|1|BA|U|405
4W29|1|BA|G|406
*
4W29|1|BA|U|421
4W29|1|BA|A|422
4W29|1|BA|A|423
4W29|1|BA|G|424

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L28