J4_4WSM_030
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGGUGGAAUUGGUAGACACGC*GUG*CUUA*UC
- Length
- 31 nucleotides
- Bulged bases
- 4WSM|1|1K|U|17, 4WSM|1|1K|G|18
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_04237.1
- Basepair signature
- cWW-F-F-F-cWH-F-F-F-F-cWW-F-F-F-F-cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
4WSM|1|1K|G|7
4WSM|1|1K|U|8
4WSM|1|1K|G|9
4WSM|1|1K|G|10
4WSM|1|1K|U|11
4WSM|1|1K|G|12
4WSM|1|1K|G|13
4WSM|1|1K|A|14
4WSM|1|1K|A|15
4WSM|1|1K|U|16
4WSM|1|1K|U|17
4WSM|1|1K|G|18
4WSM|1|1K|G|19
4WSM|1|1K|U|20
4WSM|1|1K|A|21
4WSM|1|1K|G|22
4WSM|1|1K|A|23
4WSM|1|1K|C|24
4WSM|1|1K|A|25
4WSM|1|1K|C|26
4WSM|1|1K|G|27
4WSM|1|1K|C|28
*
4WSM|1|1K|G|44
4WSM|1|1K|U|45
4WSM|1|1K|G|46
*
4WSM|1|1K|C|57
4WSM|1|1K|U|58
4WSM|1|1K|U|59
4WSM|1|1K|A|60
*
4WSM|1|1K|U|76
4WSM|1|1K|C|77
Current chains
- Chain 1K
- tRNA-Leu
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2K
- Transfer RNA; tRNA
Coloring options: