J4_4WT8_034
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGG*CGU*AAGGUCG*CC
- Length
- 16 nucleotides
- Bulged bases
- 4WT8|1|D4|U|8, 4WT8|1|D4|U|48, 4WT8|1|D4|C|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WT8|1|D4|G|7
4WT8|1|D4|U|8
4WT8|1|D4|G|9
4WT8|1|D4|G|10
*
4WT8|1|D4|C|26
4WT8|1|D4|G|27
4WT8|1|D4|U|28
*
4WT8|1|D4|A|44
4WT8|1|D4|A|45
4WT8|1|D4|G|46
4WT8|1|D4|G|47
4WT8|1|D4|U|48
4WT8|1|D4|C|49
4WT8|1|D4|G|50
*
4WT8|1|D4|C|66
4WT8|1|D4|C|67
Current chains
- Chain D4
- tRNA (76-MER)
Nearby chains
- Chain BM
- 30S ribosomal protein S13
- Chain Bb
- Small subunit ribosomal RNA; SSU rRNA
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
- Chain DP
- 50S ribosomal protein L16
- Chain DV
- Transfer RNA; tRNA
- Chain Da
- 50S ribosomal protein L27
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