J4_4XEJ_013

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGGC*GACG*CGGAAG*CGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|A23S|G|2643
4XEJ|1|A23S|G|2644
4XEJ|1|A23S|G|2645
4XEJ|1|A23S|C|2646
*
4XEJ|1|A23S|G|2674
4XEJ|1|A23S|A|2675
4XEJ|1|A23S|C|2676
4XEJ|1|A23S|G|2677
*
4XEJ|1|A23S|C|2730
4XEJ|1|A23S|G|2731
4XEJ|1|A23S|G|2732
4XEJ|1|A23S|A|2733
4XEJ|1|A23S|A|2734
4XEJ|1|A23S|G|2735
*
4XEJ|1|A23S|C|2769
4XEJ|1|A23S|G|2770
4XEJ|1|A23S|C|2771

Current chains

Chain A23S

23S ribosomal RNA

Nearby chains

Chain AL03

50S ribosomal protein L3

Chain AL13

50S ribosomal protein L13

Chain AL14

50S ribosomal protein L14