J4_5AJ0_005

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

5AJ0|1|A2|A|2675

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|A2|G|2597
5AJ0|1|A2|G|2598
*
5AJ0|1|A2|U|2616
5AJ0|1|A2|G|2617
5AJ0|1|A2|U|2618
5AJ0|1|A2|G|2619
5AJ0|1|A2|A|2620
5AJ0|1|A2|A|2621
*
5AJ0|1|A2|U|2671
5AJ0|1|A2|G|2672
5AJ0|1|A2|G|2673
5AJ0|1|A2|A|2674
5AJ0|1|A2|A|2675
5AJ0|1|A2|A|2676
5AJ0|1|A2|G|2677
*
5AJ0|1|A2|U|2697
5AJ0|1|A2|C|2698

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AR

60S ribosomal protein L19

Chain AU

60S ribosomal protein L22

Chain Ag

60S ribosomal protein L34

Chain Ak

60S ribosomal protein L38