J4_5AJ0_013
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUAG*CAG*CGUGUCCUUG*CGAGU
- Length
- 22 nucleotides
- Bulged bases
- 5AJ0|1|Bw|U|8, 5AJ0|1|Bw|U|47, 5AJ0|1|Bw|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ0|1|Bw|A|7
5AJ0|1|Bw|U|8
5AJ0|1|Bw|A|9
5AJ0|1|Bw|G|10
*
5AJ0|1|Bw|C|25
5AJ0|1|Bw|A|26
5AJ0|1|Bw|G|27
*
5AJ0|1|Bw|C|43
5AJ0|1|Bw|G|44
5AJ0|1|Bw|U|45
5AJ0|1|Bw|G|46
5AJ0|1|Bw|U|47
5AJ0|1|Bw|C|48
5AJ0|1|Bw|C|49
5AJ0|1|Bw|U|50
5AJ0|1|Bw|U|51
5AJ0|1|Bw|G|52
*
5AJ0|1|Bw|C|62
5AJ0|1|Bw|G|63
5AJ0|1|Bw|A|64
5AJ0|1|Bw|G|65
5AJ0|1|Bw|U|66
Current chains
- Chain Bw
- tRNA
Nearby chains
- Chain Ao
- 60S ribosomal protein L36a
- Chain Au
- 60S ribosomal protein L10a
- Chain BF
- 40S ribosomal protein S5
- Chain BO
- 40S ribosomal protein S14
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