J4_5LKS_004
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCCUGAGAGAUGGGCGAGCGCCGUUCCGAAGGGACG*CUCGGCCGAUCGAAAGGGAGU*AAUC*GGC
- Length
- 65 nucleotides
- Bulged bases
- 5LKS|1|L5|C|2470, 5LKS|1|L5|A|2472, 5LKS|1|L5|G|2475, 5LKS|1|L5|G|2503, 5LKS|1|L5|C|2504, 5LKS|1|L5|C|2505, 5LKS|1|L5|A|2512, 5LKS|1|L5|A|2513
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|G|2443
5LKS|1|L5|U|2444
5LKS|1|L5|C|2445
5LKS|1|L5|C|2446
5LKS|1|L5|U|2447
5LKS|1|L5|G|2448
5LKS|1|L5|A|2449
5LKS|1|L5|G|2450
5LKS|1|L5|A|2451
5LKS|1|L5|G|2452
5LKS|1|L5|A|2453
5LKS|1|L5|U|2454
5LKS|1|L5|G|2455
5LKS|1|L5|G|2456
5LKS|1|L5|G|2457
5LKS|1|L5|C|2458
5LKS|1|L5|G|2459
5LKS|1|L5|A|2460
5LKS|1|L5|G|2461
5LKS|1|L5|C|2462
5LKS|1|L5|G|2463
5LKS|1|L5|C|2464
5LKS|1|L5|C|2465
5LKS|1|L5|G|2466
5LKS|1|L5|U|2467
5LKS|1|L5|U|2468
5LKS|1|L5|C|2469
5LKS|1|L5|C|2470
5LKS|1|L5|G|2471
5LKS|1|L5|A|2472
5LKS|1|L5|A|2473
5LKS|1|L5|G|2474
5LKS|1|L5|G|2475
5LKS|1|L5|G|2476
5LKS|1|L5|A|2477
5LKS|1|L5|C|2478
5LKS|1|L5|G|2479
*
5LKS|1|L5|C|2499
5LKS|1|L5|U|2500
5LKS|1|L5|C|2501
5LKS|1|L5|G|2502
5LKS|1|L5|G|2503
5LKS|1|L5|C|2504
5LKS|1|L5|C|2505
5LKS|1|L5|G|2506
5LKS|1|L5|A|2507
5LKS|1|L5|U|2508
5LKS|1|L5|C|2509
5LKS|1|L5|G|2510
5LKS|1|L5|A|2511
5LKS|1|L5|A|2512
5LKS|1|L5|A|2513
5LKS|1|L5|G|2514
5LKS|1|L5|G|2515
5LKS|1|L5|G|2516
5LKS|1|L5|A|2517
5LKS|1|L5|G|2518
5LKS|1|L5|U|2519
*
5LKS|1|L5|A|2536
5LKS|1|L5|A|2537
5LKS|1|L5|U|2538
5LKS|1|L5|C|2539
*
5LKS|1|L5|G|2777
5LKS|1|L5|G|2778
5LKS|1|L5|C|2779
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LA
- 60S ribosomal protein L8
- Chain LG
- 60S ribosomal protein L7a
- Chain LN
- 60S ribosomal protein L15
- Chain LX
- 60S ribosomal protein L23a
- Chain Lg
- 60S ribosomal protein L34
- Chain Lj
- 60S ribosomal protein L37
- Chain Lk
- 60S ribosomal protein L38
- Chain Ll
- 60S ribosomal protein L39
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