J4_5LKS_011
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUAA*UC*GUGGGAUUAU*AGAAUCCCGCC
- Length
- 27 nucleotides
- Bulged bases
- 5LKS|1|L5|U|4677, 5LKS|1|L5|A|4708
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|G|4587
5LKS|1|L5|U|4588
5LKS|1|L5|A|4589
5LKS|1|L5|A|4590
*
5LKS|1|L5|U|4620
5LKS|1|L5|C|4621
*
5LKS|1|L5|G|4676
5LKS|1|L5|U|4677
5LKS|1|L5|G|4678
5LKS|1|L5|G|4679
5LKS|1|L5|G|4680
5LKS|1|L5|A|4681
5LKS|1|L5|U|4682
5LKS|1|L5|U|4683
5LKS|1|L5|A|4684
5LKS|1|L5|U|4685
*
5LKS|1|L5|A|4705
5LKS|1|L5|G|4706
5LKS|1|L5|A|4707
5LKS|1|L5|A|4708
5LKS|1|L5|U|4709
5LKS|1|L5|C|4710
5LKS|1|L5|C|4711
5LKS|1|L5|C|4712
5LKS|1|L5|G|4713
5LKS|1|L5|C|4714
5LKS|1|L5|C|4715
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LH
- 60S ribosomal protein L9
- Chain LO
- 60S ribosomal protein L13a
- Chain LV
- 60S ribosomal protein L23
- Chain Lm
- Ubiquitin-60S ribosomal protein L40
Coloring options: