J4_5LKS_018
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUCUUAG*CGAGACUCUGGC*GGACAAG*CCCGAGAUUGAGCAAUAA
- Length
- 44 nucleotides
- Bulged bases
- 5LKS|1|S2|A|1454
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|U|1339
5LKS|1|S2|U|1340
5LKS|1|S2|C|1341
5LKS|1|S2|U|1342
5LKS|1|S2|U|1343
5LKS|1|S2|A|1344
5LKS|1|S2|G|1345
*
5LKS|1|S2|C|1384
5LKS|1|S2|G|1385
5LKS|1|S2|A|1386
5LKS|1|S2|G|1387
5LKS|1|S2|A|1388
5LKS|1|S2|C|1389
5LKS|1|S2|U|1390
5LKS|1|S2|C|1391
5LKS|1|S2|U|1392
5LKS|1|S2|G|1393
5LKS|1|S2|G|1394
5LKS|1|S2|C|1395
*
5LKS|1|S2|G|1450
5LKS|1|S2|G|1451
5LKS|1|S2|A|1452
5LKS|1|S2|C|1453
5LKS|1|S2|A|1454
5LKS|1|S2|A|1455
5LKS|1|S2|G|1456
*
5LKS|1|S2|C|1470
5LKS|1|S2|C|1471
5LKS|1|S2|C|1472
5LKS|1|S2|G|1473
5LKS|1|S2|A|1474
5LKS|1|S2|G|1475
5LKS|1|S2|A|1476
5LKS|1|S2|U|1477
5LKS|1|S2|U|1478
5LKS|1|S2|G|1479
5LKS|1|S2|A|1480
5LKS|1|S2|G|1481
5LKS|1|S2|C|1482
5LKS|1|S2|A|1483
5LKS|1|S2|A|1484
5LKS|1|S2|U|1485
5LKS|1|S2|A|1486
5LKS|1|S2|A|1487
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain SD
- 40S ribosomal protein S3
- Chain SF
- 40S ribosomal protein S5
- Chain SQ
- 40S ribosomal protein S16
- Chain SR
- 40S ribosomal protein S17
- Chain SU
- 40S ribosomal protein S20
- Chain Sc
- 40S ribosomal protein S28
- Chain Sd
- 40S ribosomal protein S29
- Chain Sg
- Receptor of activated protein C kinase 1
Coloring options: