J4_5LKS_020
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCGCGCUCUC*GCCGGGC*GCCACGCGCGCGUCCCCCGAAGAGGGGGACGGCGGAGCGAGCGCACGGGGU
- Length
- 90 nucleotides
- Bulged bases
- 5LKS|1|L5|C|962, 5LKS|1|L5|G|963, 5LKS|1|L5|A|964, 5LKS|1|L5|G|965, 5LKS|1|L5|A|966, 5LKS|1|L5|C|969, 5LKS|1|L5|G|970, 5LKS|1|L5|G|976, 5LKS|1|L5|C|981, 5LKS|1|L5|C|1237, 5LKS|1|L5|C|1245, 5LKS|1|L5|A|1255, 5LKS|1|L5|C|1267, 5LKS|1|L5|G|1271, 5LKS|1|L5|C|1280, 5LKS|1|L5|G|1281, 5LKS|1|L5|G|1284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|A|711
5LKS|1|L5|C|712
5LKS|1|L5|C|713
*
5LKS|1|L5|G|955
5LKS|1|L5|A|956
5LKS|1|L5|G|957
5LKS|1|L5|G|958
5LKS|1|L5|G|959
5LKS|1|L5|A|960
5LKS|1|L5|G|961
5LKS|1|L5|C|962
5LKS|1|L5|G|963
5LKS|1|L5|A|964
5LKS|1|L5|G|965
5LKS|1|L5|A|966
5LKS|1|L5|C|967
5LKS|1|L5|C|968
5LKS|1|L5|C|969
5LKS|1|L5|G|970
5LKS|1|L5|U|971
5LKS|1|L5|C|972
5LKS|1|L5|G|973
5LKS|1|L5|C|974
5LKS|1|L5|C|975
5LKS|1|L5|G|976
5LKS|1|L5|C|977
5LKS|1|L5|G|978
5LKS|1|L5|C|979
5LKS|1|L5|U|980
5LKS|1|L5|C|981
5LKS|1|L5|U|982
5LKS|1|L5|C|983
*
5LKS|1|L5|G|1070
5LKS|1|L5|C|1071
5LKS|1|L5|C|1072
5LKS|1|L5|G|1073
5LKS|1|L5|G|1074
5LKS|1|L5|G|1075
5LKS|1|L5|C|1076
*
5LKS|1|L5|G|1235
5LKS|1|L5|C|1236
5LKS|1|L5|C|1237
5LKS|1|L5|A|1238
5LKS|1|L5|C|1239
5LKS|1|L5|G|1240
5LKS|1|L5|C|1241
5LKS|1|L5|G|1242
5LKS|1|L5|C|1243
5LKS|1|L5|G|1244
5LKS|1|L5|C|1245
5LKS|1|L5|G|1246
5LKS|1|L5|U|1247
5LKS|1|L5|C|1248
5LKS|1|L5|C|1249
5LKS|1|L5|C|1250
5LKS|1|L5|C|1251
5LKS|1|L5|C|1252
5LKS|1|L5|G|1253
5LKS|1|L5|A|1254
5LKS|1|L5|A|1255
5LKS|1|L5|G|1256
5LKS|1|L5|A|1257
5LKS|1|L5|G|1258
5LKS|1|L5|G|1259
5LKS|1|L5|G|1260
5LKS|1|L5|G|1261
5LKS|1|L5|G|1262
5LKS|1|L5|A|1263
5LKS|1|L5|C|1264
5LKS|1|L5|G|1265
5LKS|1|L5|G|1266
5LKS|1|L5|C|1267
5LKS|1|L5|G|1268
5LKS|1|L5|G|1269
5LKS|1|L5|A|1270
5LKS|1|L5|G|1271
5LKS|1|L5|C|1272
5LKS|1|L5|G|1273
5LKS|1|L5|A|1274
5LKS|1|L5|G|1275
5LKS|1|L5|C|1276
5LKS|1|L5|G|1277
5LKS|1|L5|C|1278
5LKS|1|L5|A|1279
5LKS|1|L5|C|1280
5LKS|1|L5|G|1281
5LKS|1|L5|G|1282
5LKS|1|L5|G|1283
5LKS|1|L5|G|1284
5LKS|1|L5|U|1285
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LE
- 60S ribosomal protein L6
- Chain LF
- 60S ribosomal protein L7
- Chain Le
- 60S ribosomal protein L32
- Chain Lf
- 60S ribosomal protein L35a
- Chain Lr
- 60S ribosomal protein L28
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