J4_5MMI_003

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUG*CGUAG*CGAG*CAAUUG

Length

19 nucleotides

Bulged bases

5MMI|1|A|U|613

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|A|C|611
5MMI|1|A|U|612
5MMI|1|A|U|613
5MMI|1|A|G|614
*
5MMI|1|A|C|636
5MMI|1|A|G|637
5MMI|1|A|U|638
5MMI|1|A|A|639
5MMI|1|A|G|640
*
5MMI|1|A|C|647
5MMI|1|A|G|648
5MMI|1|A|A|649
5MMI|1|A|G|650
*
5MMI|1|A|C|662
5MMI|1|A|A|663
5MMI|1|A|A|664
5MMI|1|A|U|665
5MMI|1|A|U|666
5MMI|1|A|G|667

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L35, chloroplastic

Chain E

plastid ribosomal protein uL4c

Chain M

plastid ribosomal protein uL15c