J4_5MY1_002

3D structure

PDB id

5MY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli expressome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

5MY1|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MY1|1|A|G|142
5MY1|1|A|A|143
5MY1|1|A|G|144
*
5MY1|1|A|C|178
5MY1|1|A|A|179
5MY1|1|A|U|180
5MY1|1|A|A|181
5MY1|1|A|A|182
5MY1|1|A|C|183
5MY1|1|A|G|184
*
5MY1|1|A|C|193
5MY1|1|A|C|194
5MY1|1|A|A|195
5MY1|1|A|A|196
5MY1|1|A|A|197
5MY1|1|A|G|198
*
5MY1|1|A|U|219
5MY1|1|A|G|220
5MY1|1|A|C|221

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S20