J4_5O60_006

3D structure

PDB id

5O60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.18 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O60|1|A|G|1664
5O60|1|A|U|1665
5O60|1|A|A|1666
5O60|1|A|C|1667
*
5O60|1|A|G|1686
5O60|1|A|G|1687
5O60|1|A|G|1688
*
5O60|1|A|C|1747
5O60|1|A|A|1748
5O60|1|A|U|1749
5O60|1|A|A|1750
5O60|1|A|G|1751
*
5O60|1|A|C|1762
5O60|1|A|G|1763
5O60|1|A|A|1764
5O60|1|A|A|1765
5O60|1|A|U|1766
5O60|1|A|U|1767
5O60|1|A|C|1768

Current chains

Chain A

23S rRNA

Nearby chains