J4_5O61_011

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

5O61|1|BA|C|117

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O61|1|BA|G|111
5O61|1|BA|A|112
5O61|1|BA|G|113
5O61|1|BA|U|114
5O61|1|BA|A|115
5O61|1|BA|A|116
5O61|1|BA|C|117
5O61|1|BA|A|118
5O61|1|BA|C|119
*
5O61|1|BA|G|238
5O61|1|BA|G|239
5O61|1|BA|C|240
*
5O61|1|BA|G|286
5O61|1|BA|U|287
5O61|1|BA|A|288
5O61|1|BA|G|289
*
5O61|1|BA|C|311
5O61|1|BA|C|312

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BP

30S ribosomal protein S16

Chain BQ

30S ribosomal protein S17