J4_5O61_016

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

UU*AAUACAC*GGAAAG*CG

Length

17 nucleotides

Bulged bases

5O61|1|BA|C|179, 5O61|1|BA|A|180, 5O61|1|BA|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O61|1|BA|U|140
5O61|1|BA|U|141
*
5O61|1|BA|A|175
5O61|1|BA|A|176
5O61|1|BA|U|177
5O61|1|BA|A|178
5O61|1|BA|C|179
5O61|1|BA|A|180
5O61|1|BA|C|181
*
5O61|1|BA|G|207
5O61|1|BA|G|208
5O61|1|BA|A|209
5O61|1|BA|A|210
5O61|1|BA|A|211
5O61|1|BA|G|212
*
5O61|1|BA|C|219
5O61|1|BA|G|220

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BQ

30S ribosomal protein S17

Chain BT

30S ribosomal protein S20