J4_5OT7_006
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAGGCCUUGACAUGCUAGGGAACCC*GGGGU*GAGCCCUAGCACAGG*CCUUACGGCCUG
- Length
- 57 nucleotides
- Bulged bases
- 5OT7|1|1|C|990, 5OT7|1|1|C|1038, 5OT7|1|1|U|1212, 5OT7|1|1|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|1|C|985
5OT7|1|1|A|986
5OT7|1|1|G|987
5OT7|1|1|G|988
5OT7|1|1|C|989
5OT7|1|1|C|990
5OT7|1|1|U|991
5OT7|1|1|U|992
5OT7|1|1|G|993
5OT7|1|1|A|994
5OT7|1|1|C|995
5OT7|1|1|A|996
5OT7|1|1|U|997
5OT7|1|1|G|998
5OT7|1|1|C|999
5OT7|1|1|U|1000
5OT7|1|1|A|1001
5OT7|1|1|G|1001|||A
5OT7|1|1|G|1002
5OT7|1|1|G|1003
5OT7|1|1|A|1004
5OT7|1|1|A|1005
5OT7|1|1|C|1006
5OT7|1|1|C|1007
5OT7|1|1|C|1008
*
5OT7|1|1|G|1021
5OT7|1|1|G|1022
5OT7|1|1|G|1023
5OT7|1|1|G|1024
5OT7|1|1|U|1025
*
5OT7|1|1|G|1034
5OT7|1|1|A|1035
5OT7|1|1|G|1036
5OT7|1|1|C|1037
5OT7|1|1|C|1038
5OT7|1|1|C|1039
5OT7|1|1|U|1040
5OT7|1|1|A|1041
5OT7|1|1|G|1042
5OT7|1|1|C|1043
5OT7|1|1|A|1044
5OT7|1|1|C|1045
5OT7|1|1|A|1046
5OT7|1|1|G|1047
5OT7|1|1|G|1048
*
5OT7|1|1|C|1209
5OT7|1|1|C|1210
5OT7|1|1|U|1211
5OT7|1|1|U|1212
5OT7|1|1|A|1213
5OT7|1|1|C|1214
5OT7|1|1|G|1215
5OT7|1|1|G|1216
5OT7|1|1|C|1217
5OT7|1|1|C|1218
5OT7|1|1|U|1219
5OT7|1|1|G|1220
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain M
- 30S ribosomal protein S14 type Z
- Chain R
- 30S ribosomal protein S19
- Chain U
- Elongation factor G
Coloring options: