J4_5OT7_018
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUAAAGGG*CGAAAGCGU*ACGCCCUAAACGAUG*CCG
- Length
- 36 nucleotides
- Bulged bases
- 5OT7|1|1|A|572, 5OT7|1|1|G|576, 5OT7|1|1|A|815, 5OT7|1|1|C|817, 5OT7|1|1|A|819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|1|C|569
5OT7|1|1|G|570
5OT7|1|1|U|571
5OT7|1|1|A|572
5OT7|1|1|A|573
5OT7|1|1|A|574
5OT7|1|1|G|575
5OT7|1|1|G|576
5OT7|1|1|G|577
*
5OT7|1|1|C|764
5OT7|1|1|G|765
5OT7|1|1|A|766
5OT7|1|1|A|767
5OT7|1|1|A|768
5OT7|1|1|G|769
5OT7|1|1|C|770
5OT7|1|1|G|771
5OT7|1|1|U|772
*
5OT7|1|1|A|807
5OT7|1|1|C|808
5OT7|1|1|G|809
5OT7|1|1|C|810
5OT7|1|1|C|811
5OT7|1|1|C|812
5OT7|1|1|U|813
5OT7|1|1|A|814
5OT7|1|1|A|815
5OT7|1|1|A|816
5OT7|1|1|C|817
5OT7|1|1|G|818
5OT7|1|1|A|819
5OT7|1|1|U|820
5OT7|1|1|G|821
*
5OT7|1|1|C|879
5OT7|1|1|C|880
5OT7|1|1|G|881
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 30S ribosomal protein S8
- Chain K
- 30S ribosomal protein S12
- Chain N
- 30S ribosomal protein S15
- Chain P
- 30S ribosomal protein S17
- Chain g
- 50S ribosomal protein L2
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