J4_5OT7_019
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGUGGAG*CUACAAUG*CCCAGUUC*GCCGGAAUCG
- Length
- 34 nucleotides
- Bulged bases
- 5OT7|1|1|U|1240, 5OT7|1|1|C|1298, 5OT7|1|1|U|1302
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|1|C|940
5OT7|1|1|G|941
5OT7|1|1|G|942
5OT7|1|1|U|943
5OT7|1|1|G|944
5OT7|1|1|G|945
5OT7|1|1|A|946
5OT7|1|1|G|947
*
5OT7|1|1|C|1234
5OT7|1|1|U|1235
5OT7|1|1|A|1236
5OT7|1|1|C|1237
5OT7|1|1|A|1238
5OT7|1|1|A|1239
5OT7|1|1|U|1240
5OT7|1|1|G|1241
*
5OT7|1|1|C|1296
5OT7|1|1|C|1297
5OT7|1|1|C|1298
5OT7|1|1|A|1299
5OT7|1|1|G|1300
5OT7|1|1|U|1301
5OT7|1|1|U|1302
5OT7|1|1|C|1303
*
5OT7|1|1|G|1334
5OT7|1|1|C|1335
5OT7|1|1|C|1336
5OT7|1|1|G|1337
5OT7|1|1|G|1338
5OT7|1|1|A|1339
5OT7|1|1|A|1340
5OT7|1|1|U|1341
5OT7|1|1|C|1342
5OT7|1|1|G|1343
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain F
- 30S ribosomal protein S7
- Chain H
- 30S ribosomal protein S9
- Chain L
- 30S ribosomal protein S13
- Chain T
- 30S ribosomal protein Thx
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