J4_5OT7_021
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUGCC*GCGG*UCCUAAGGUAG*CGAAAA
- Length
- 26 nucleotides
- Bulged bases
- 5OT7|1|4|C|1925, 5OT7|1|4|A|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|4|U|1833
5OT7|1|4|U|1834
5OT7|1|4|G|1835
5OT7|1|4|C|1836
5OT7|1|4|C|1837
*
5OT7|1|4|G|1904
5OT7|1|4|C|1905
5OT7|1|4|G|1906
5OT7|1|4|G|1907
*
5OT7|1|4|U|1923
5OT7|1|4|C|1924
5OT7|1|4|C|1925
5OT7|1|4|U|1926
5OT7|1|4|A|1927
5OT7|1|4|A|1928
5OT7|1|4|G|1929
5OT7|1|4|G|1930
5OT7|1|4|U|1931
5OT7|1|4|A|1932
5OT7|1|4|G|1933
*
5OT7|1|4|C|1967
5OT7|1|4|G|1968
5OT7|1|4|A|1969
5OT7|1|4|A|1970
5OT7|1|4|A|1971
5OT7|1|4|A|1972
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 1
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2
- Transfer RNA; tRNA
- Chain g
- 50S ribosomal protein L2
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