J4_5T2C_005

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

5T2C|1|A|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|2618
5T2C|1|A|G|2619
*
5T2C|1|A|U|2637
5T2C|1|A|G|2638
5T2C|1|A|U|2639
5T2C|1|A|G|2640
5T2C|1|A|A|2641
5T2C|1|A|A|2642
*
5T2C|1|A|U|2692
5T2C|1|A|G|2693
5T2C|1|A|G|2694
5T2C|1|A|A|2695
5T2C|1|A|A|2696
5T2C|1|A|A|2697
5T2C|1|A|G|2698
*
5T2C|1|A|U|2718
5T2C|1|A|C|2719

Current chains

Chain A

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L19

Chain O

60S ribosomal protein L22

Chain a

60S ribosomal protein L34

Chain e

60S ribosomal protein L38