J4_5T7V_004
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAG*CGUAG*CGAGU*GCGUUUAG
- Length
- 22 nucleotides
- Bulged bases
- 5T7V|1|B|U|699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_5T7V_004 not in the Motif Atlas
- Homologous match to J4_4WF9_003
- Geometric discrepancy: 0.2179
- The information below is about J4_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
5T7V|1|B|C|644
5T7V|1|B|A|645
5T7V|1|B|A|646
5T7V|1|B|G|647
*
5T7V|1|B|C|669
5T7V|1|B|G|670
5T7V|1|B|U|671
5T7V|1|B|A|672
5T7V|1|B|G|673
*
5T7V|1|B|C|680
5T7V|1|B|G|681
5T7V|1|B|A|682
5T7V|1|B|G|683
5T7V|1|B|U|684
*
5T7V|1|B|G|694
5T7V|1|B|C|695
5T7V|1|B|G|696
5T7V|1|B|U|697
5T7V|1|B|U|698
5T7V|1|B|U|699
5T7V|1|B|A|700
5T7V|1|B|G|701
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain LH
- 50S ribosomal protein L35
- Chain LJ
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L15
Coloring options: