J4_5TCU_005
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCCUAAGCUGAGG*CGUAGGCGAUGGAUAAC*GUACC*GC
- Length
- 38 nucleotides
- Bulged bases
- 5TCU|1|B|A|1421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|G|1385
5TCU|1|B|U|1386
5TCU|1|B|C|1387
5TCU|1|B|C|1388
5TCU|1|B|U|1389
5TCU|1|B|A|1390
5TCU|1|B|A|1391
5TCU|1|B|G|1392
5TCU|1|B|C|1393
5TCU|1|B|U|1394
5TCU|1|B|G|1395
5TCU|1|B|A|1396
5TCU|1|B|G|1397
5TCU|1|B|G|1398
*
5TCU|1|B|C|1407
5TCU|1|B|G|1408
5TCU|1|B|U|1409
5TCU|1|B|A|1410
5TCU|1|B|G|1411
5TCU|1|B|G|1412
5TCU|1|B|C|1413
5TCU|1|B|G|1414
5TCU|1|B|A|1415
5TCU|1|B|U|1416
5TCU|1|B|G|1417
5TCU|1|B|G|1418
5TCU|1|B|A|1419
5TCU|1|B|U|1420
5TCU|1|B|A|1421
5TCU|1|B|A|1422
5TCU|1|B|C|1423
*
5TCU|1|B|G|1438
5TCU|1|B|U|1439
5TCU|1|B|A|1440
5TCU|1|B|C|1441
5TCU|1|B|C|1442
*
5TCU|1|B|G|1641
5TCU|1|B|C|1642
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L2
- 50S ribosomal protein L2
- Chain L6
- 50S ribosomal protein L23
- Chain LA
- 50S ribosomal protein L28
- Chain LG
- 50S ribosomal protein L34
Coloring options: