J4_5TCU_008

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAAAGGU*GCUUGAC*GGG*CGG

Length

20 nucleotides

Bulged bases

5TCU|1|B|A|2315

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|C|2312
5TCU|1|B|A|2313
5TCU|1|B|A|2314
5TCU|1|B|A|2315
5TCU|1|B|G|2316
5TCU|1|B|G|2317
5TCU|1|B|U|2318
*
5TCU|1|B|G|2368
5TCU|1|B|C|2369
5TCU|1|B|U|2370
5TCU|1|B|U|2371
5TCU|1|B|G|2372
5TCU|1|B|A|2373
5TCU|1|B|C|2374
*
5TCU|1|B|G|2397
5TCU|1|B|G|2398
5TCU|1|B|G|2399
*
5TCU|1|B|C|2408
5TCU|1|B|G|2409
5TCU|1|B|G|2410

Current chains

Chain B

23S RRNA

Nearby chains

Chain L9

50S ribosomal protein L27

Chain LH

50S ribosomal protein L35

Chain LS

50S ribosomal protein L33 1