J4_5TCU_012

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAGUAACAC*GCU*AUAG*CC

Length

18 nucleotides

Bulged bases

5TCU|1|A|C|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|114
5TCU|1|A|A|115
5TCU|1|A|G|116
5TCU|1|A|U|117
5TCU|1|A|A|118
5TCU|1|A|A|119
5TCU|1|A|C|120
5TCU|1|A|A|121
5TCU|1|A|C|122
*
5TCU|1|A|G|246
5TCU|1|A|C|247
5TCU|1|A|U|248
*
5TCU|1|A|A|294
5TCU|1|A|U|295
5TCU|1|A|A|296
5TCU|1|A|G|297
*
5TCU|1|A|C|319
5TCU|1|A|C|320

Current chains

Chain A

16S RRNA

Nearby chains

Chain S3

30S ribosomal protein S12

Chain S7

30S ribosomal protein S16

Chain S8

30S ribosomal protein S17