J4_5TCU_013
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGGAGCA*UGCUACAAUG*CUCAGUUC*GCUGGAAU
- Length
- 34 nucleotides
- Bulged bases
- 5TCU|1|A|U|1251, 5TCU|1|A|U|1313, 5TCU|1|A|U|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|A|G|952
5TCU|1|A|U|953
5TCU|1|A|G|954
5TCU|1|A|G|955
5TCU|1|A|A|956
5TCU|1|A|G|957
5TCU|1|A|C|958
5TCU|1|A|A|959
*
5TCU|1|A|U|1243
5TCU|1|A|G|1244
5TCU|1|A|C|1245
5TCU|1|A|U|1246
5TCU|1|A|A|1247
5TCU|1|A|C|1248
5TCU|1|A|A|1249
5TCU|1|A|A|1250
5TCU|1|A|U|1251
5TCU|1|A|G|1252
*
5TCU|1|A|C|1307
5TCU|1|A|U|1308
5TCU|1|A|C|1309
5TCU|1|A|A|1310
5TCU|1|A|G|1311
5TCU|1|A|U|1312
5TCU|1|A|U|1313
5TCU|1|A|C|1314
*
5TCU|1|A|G|1345
5TCU|1|A|C|1346
5TCU|1|A|U|1347
5TCU|1|A|G|1348
5TCU|1|A|G|1349
5TCU|1|A|A|1350
5TCU|1|A|A|1351
5TCU|1|A|U|1352
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain E
- Transfer RNA; tRNA
- Chain S4
- 30S ribosomal protein S13
- Chain SG
- 30S ribosomal protein S7
- Chain SH
- 30S ribosomal protein S9
Coloring options: