J4_5UZ4_002

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

5UZ4|1|A|C|183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|G|142
5UZ4|1|A|A|143
5UZ4|1|A|G|144
*
5UZ4|1|A|C|178
5UZ4|1|A|A|179
5UZ4|1|A|U|180
5UZ4|1|A|A|181
5UZ4|1|A|A|182
5UZ4|1|A|C|183
5UZ4|1|A|G|184
*
5UZ4|1|A|C|193
5UZ4|1|A|C|194
5UZ4|1|A|A|195
5UZ4|1|A|A|196
5UZ4|1|A|A|197
5UZ4|1|A|G|198
*
5UZ4|1|A|U|219
5UZ4|1|A|G|220
5UZ4|1|A|C|221

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S ribosomal protein S20